bionty.CellMarker#

class bionty.CellMarker(organism=None, source=None, version=None, **kwargs)#

Bases: Bionty

Cell markers.

1. Cell Marker Ontology Edits of terms are coordinated and reviewed on: http://bio-bigdata.hrbmu.edu.cn/CellMarker/

Parameters:

  • organism (Optional[Literal['human', 'mouse']], default: None) – name of Organism entity.

  • source (Optional[Literal['cellmarker']], default: None) – The key of the source in the local.yml versions file. Get all available databases with bionty.display_available_sources.

  • version (Optional[str], default: None) – The version of the ontology. Typically a date or an actual version. Get available versions with bionty.display_available_sources.

Attributes

fields property#

All Bionty entity fields.

organism property#

The name of Organism Bionty.

source property#

Name of the source.

version property#

The name of version entity Bionty.